EnhancerDB
  1. Home
  2. SNP
  3. rs138660339[chr2:232546391]
Enhancers that have rs138660339[chr2:232546391]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138660339[chr2:232546391]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232544681 232546691 POLR2A UCSC Txn Factor no Conserved 108435746
chr2 232544681 232546691 POLR2A UCSC Txn Factor no Conserved 108435747
chr2 232546383 232546397 ATF7 JASPAR yes 81735930
chr2 232546386 232546394 CREB1 JASPAR yes 81735931
chr2 232546391 232546401 ZNF740 JASPAR yes 81735932
Genes associated with rs138660339[chr2:232546391], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More