EnhancerDB
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  3. rs138684900[chr1:52035376]
Enhancers that have rs138684900[chr1:52035376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs138684900[chr1:52035376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52034973 52035493 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803467
chr1 52034974 52035564 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803468
chr1 52035010 52035526 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803469
chr1 52035053 52035737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803470
chr1 52035064 52035788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803471
chr1 52035117 52035437 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803472
chr1 52035150 52035427 RUNX3 UCSC Txn Factor no Conserved 107803473
chr1 52035150 52035427 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803474
chr1 52035226 52035876 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803475
chr1 52035228 52035818 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803476
chr1 52035326 52035482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803477
chr1 52035330 52035840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803478
chr1 52035345 52035869 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803479
chr1 52035349 52035819 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107803480
chr1 52035356 52035896 EP300 UCSC Txn Factor no Conserved 107803481
chr1 52035356 52035896 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107803482
chr1 52035357 52035827 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107803483
chr1 52035357 52035863 GATA3 UCSC Txn Factor no Conserved 107803484
chr1 52035368 52035908 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107803485
Genes associated with rs138684900[chr1:52035376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More