EnhancerDB
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  3. rs138717596[chr1:8462620]
Enhancers that have rs138717596[chr1:8462620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138717596[chr1:8462620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8462605 8462620 RFX5 JASPAR yes 26549223
chr1 8462616 8462620 NFE TRANSFAC yes 26549225
chr1 8462616 8462621 GATA1 TRANSFAC yes 26549226
chr1 8462616 8462622 GATA3 JASPAR yes 26549227
Genes associated with rs138717596[chr1:8462620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More