EnhancerDB
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  3. rs138724522[chr17:78652846]
Enhancers that have rs138724522[chr17:78652846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr17 78652497 78652856 vista26335
VISTA
Transcript factors that have rs138724522[chr17:78652846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78652490 78652860 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797085
chr17 78652490 78652860 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108307147
chr17 78652841 78652855 POU4F1 JASPAR yes 21314988
chr17 78652841 78652855 POU4F1 JASPAR yes 56266874
chr17 78652841 78652857 POU4F2 JASPAR yes 21314989
chr17 78652841 78652857 POU4F3 JASPAR yes 21314990
chr17 78652841 78652857 POU4F2 JASPAR yes 56266875
chr17 78652841 78652857 POU4F3 JASPAR yes 56266876
chr17 78652844 78652848 YY1 TRANSFAC yes 21314991
chr17 78652844 78652848 YY1 TRANSFAC yes 56266877
chr17 78652845 78652859 ONECUT1 JASPAR yes 21314992
chr17 78652845 78652859 ONECUT2 JASPAR yes 21314993
chr17 78652845 78652859 ONECUT3 JASPAR yes 21314994
chr17 78652845 78652859 ONECUT1 JASPAR yes 56266878
chr17 78652845 78652859 ONECUT2 JASPAR yes 56266879
chr17 78652845 78652859 ONECUT3 JASPAR yes 56266880
chr17 78652846 78652856 CUX1 JASPAR yes 21314995
chr17 78652846 78652856 CUX2 JASPAR yes 21314996
chr17 78652846 78652856 PAX3 JASPAR yes 21314997
chr17 78652846 78652856 PAX7 JASPAR yes 21314998
chr17 78652846 78652856 CUX1 JASPAR yes 56266881
chr17 78652846 78652856 CUX2 JASPAR yes 56266882
chr17 78652846 78652856 PAX3 JASPAR yes 56266883
chr17 78652846 78652856 PAX7 JASPAR yes 56266884
Genes associated with rs138724522[chr17:78652846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More