EnhancerDB
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  3. rs138748862[chr13:113373717]
Enhancers that have rs138748862[chr13:113373717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs138748862[chr13:113373717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113372695 113374779 ZNF143 GTRD no Epithelial (MCF-7) 21605722
chr13 113372695 113374779 ZNF143 GTRD no Epithelial (MCF-7) 108090450
chr13 113372816 113374372 ZNF143 GTRD no Epithelial (MCF-7) 21605726
chr13 113372816 113374372 ZNF143 GTRD no Epithelial (MCF-7) 108090456
chr13 113373715 113373725 EMX1 JASPAR yes 60429765
chr13 113373715 113373725 EMX2 JASPAR yes 60429766
chr13 113373715 113373725 ESX1 JASPAR yes 60429767
chr13 113373715 113373725 GSX1 JASPAR yes 60429768
chr13 113373715 113373725 GSX2 JASPAR yes 60429769
chr13 113373715 113373725 HESX1 JASPAR yes 60429770
chr13 113373715 113373725 HOXB2 JASPAR yes 60429771
chr13 113373715 113373725 HOXB3 JASPAR yes 60429772
chr13 113373715 113373725 LBX2 JASPAR yes 60429773
chr13 113373715 113373725 LHX2 JASPAR yes 60429774
chr13 113373715 113373725 LHX6 JASPAR yes 60429775
chr13 113373715 113373725 MIXL1 JASPAR yes 60429776
chr13 113373715 113373725 MNX1 JASPAR yes 60429777
chr13 113373715 113373725 NOTO JASPAR yes 60429778
chr13 113373715 113373725 POU6F1 JASPAR yes 60429779
chr13 113373715 113373725 RAX JASPAR yes 60429780
chr13 113373716 113373724 ISX JASPAR yes 60429781
chr13 113373716 113373724 LMX1A JASPAR yes 60429782
chr13 113373716 113373724 LMX1B JASPAR yes 60429783
chr13 113373716 113373724 NKX6-1 JASPAR yes 60429784
chr13 113373716 113373724 NKX6-2 JASPAR yes 60429785
chr13 113373716 113373724 PRRX1 JASPAR yes 60429786
chr13 113373716 113373724 RAX2 JASPAR yes 60429787
chr13 113373716 113373724 SHOX JASPAR yes 60429788
chr13 113373716 113373724 UNCX JASPAR yes 60429789
chr13 113373716 113373724 VAX1 JASPAR yes 60429790
chr13 113373716 113373726 POU6F2 JASPAR yes 60429791
Genes associated with rs138748862[chr13:113373717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More