EnhancerDB
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  3. rs138768941[chr1:223356227]
Enhancers that have rs138768941[chr1:223356227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223346429 223358855 enh12705
Prostate (PC-3) Brain (SK-N-MC) Esophagus Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
chr1 223356140 223356312 vista5264
VISTA
Transcript factors that have rs138768941[chr1:223356227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223355373 223356568 P63 GTRD no Skin (Keratinocyte) 107872936
chr1 223355379 223356321 P63 GTRD no Skin (Keratinocyte) 107872937
chr1 223355482 223356478 P63 GTRD no Skin (Keratinocyte) 107872938
chr1 223355485 223356483 P63 GTRD no Skin (Keratinocyte) 107872939
chr1 223355524 223356314 ZNF143 GTRD no Epithelial (MCF-7) 21383469
chr1 223355524 223356314 ZNF143 GTRD no Epithelial (MCF-7) 107872940
chr1 223355552 223356331 ZNF143 GTRD no Epithelial (MCF-7) 21383470
chr1 223355552 223356331 ZNF143 GTRD no Epithelial (MCF-7) 107872941
chr1 223355579 223356323 ZNF143 GTRD no Epithelial (MCF-7) 21383471
chr1 223355579 223356323 ZNF143 GTRD no Epithelial (MCF-7) 107872942
chr1 223355712 223356271 ZNF143 GTRD no Epithelial (MCF-7) 21383473
chr1 223355712 223356271 ZNF143 GTRD no Epithelial (MCF-7) 107872943
chr1 223356225 223356239 ONECUT1 JASPAR yes 35646026
chr1 223356225 223356239 ONECUT2 JASPAR yes 35646027
chr1 223356225 223356239 ONECUT3 JASPAR yes 35646028
chr1 223356225 223356239 ONECUT1 JASPAR yes 118466497
chr1 223356225 223356239 ONECUT2 JASPAR yes 118466498
chr1 223356225 223356239 ONECUT3 JASPAR yes 118466499
chr1 223356225 223356240 HNF1A JASPAR yes 35646029
chr1 223356225 223356240 HNF1A JASPAR yes 118466500
Genes associated with rs138768941[chr1:223356227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More