EnhancerDB
  1. Home
  2. SNP
  3. rs138875569[chr1:171392646]
Enhancers that have rs138875569[chr1:171392646]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs138875569[chr1:171392646]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171392505 171393062 TCF7L2 GTRD no Colon (HCT116) 21349623
chr1 171392551 171392951 TCF7L2 GTRD no Colon (HCT116) 21349624
chr1 171392641 171392801 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21349625
chr1 171392642 171392653 ETV2 JASPAR yes 33078874
chr1 171392643 171392653 NFATC3 JASPAR yes 33078875
chr1 171392645 171392651 ETS1 JASPAR yes 33078876
Genes associated with rs138875569[chr1:171392646], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More