EnhancerDB
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  3. rs138879642[chr2:232548287]
Enhancers that have rs138879642[chr2:232548287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232548018 232548333 vista35177
VISTA
Transcript factors that have rs138879642[chr2:232548287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232548278 232548288 ZNF740 JASPAR yes 22230189
chr2 232548278 232548288 ZNF740 JASPAR yes 81736197
chr2 232548278 232548298 RREB1 JASPAR yes 22230190
chr2 232548278 232548298 RREB1 JASPAR yes 81736198
chr2 232548279 232548289 ZNF740 JASPAR yes 22230191
chr2 232548279 232548289 ZNF740 JASPAR yes 81736199
chr2 232548280 232548290 MZF1 JASPAR yes 22230192
chr2 232548280 232548290 SP1 JASPAR yes 22230193
chr2 232548280 232548290 ZNF740 JASPAR yes 22230194
chr2 232548280 232548290 MZF1 JASPAR yes 81736200
chr2 232548280 232548290 SP1 JASPAR yes 81736201
chr2 232548280 232548290 ZNF740 JASPAR yes 81736202
chr2 232548281 232548295 PLAG1 JASPAR yes 22230195
chr2 232548281 232548295 PLAG1 JASPAR yes 81736203
chr2 232548287 232548301 PLAG1 JASPAR yes 22230196
chr2 232548287 232548301 PLAG1 JASPAR yes 81736204
chr2 232548287 232548302 RUNX2 JASPAR yes 22230197
chr2 232548287 232548302 RUNX2 JASPAR yes 81736205
Genes associated with rs138879642[chr2:232548287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More