EnhancerDB
  1. Home
  2. SNP
  3. rs138911230[chr5:79490689]
Enhancers that have rs138911230[chr5:79490689]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs138911230[chr5:79490689]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79490687 79490696 PITX3 JASPAR yes 63704786
chr5 79490687 79490697 GSC2 JASPAR yes 63704787
chr5 79490687 79490697 GSC JASPAR yes 63704788
chr5 79490688 79490696 OTX1 JASPAR yes 63704789
Genes associated with rs138911230[chr5:79490689], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More