EnhancerDB
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  3. rs138953802[chr6:11224868]
Enhancers that have rs138953802[chr6:11224868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs138953802[chr6:11224868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11224847 11224868 IRF1 JASPAR yes 99866580
chr6 11224848 11224869 IRF1 JASPAR yes 99866581
chr6 11224852 11224873 IRF1 JASPAR yes 99866584
chr6 11224853 11224868 FOXP1 JASPAR yes 99866585
Genes associated with rs138953802[chr6:11224868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More