EnhancerDB
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  3. rs138998288[chr1:24603340]
Enhancers that have rs138998288[chr1:24603340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs138998288[chr1:24603340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24603334 24603342 MGA JASPAR yes 27494484
chr1 24603334 24603342 TBX1 JASPAR yes 27494485
chr1 24603334 24603346 HES5 JASPAR yes 27494486
chr1 24603334 24603346 HES7 JASPAR yes 27494487
chr1 24603335 24603345 BHLHE40 JASPAR yes 27494488
chr1 24603335 24603345 CLOCK JASPAR yes 27494489
chr1 24603335 24603345 HEY1 JASPAR yes 27494490
chr1 24603335 24603345 MAX JASPAR yes 27494491
chr1 24603335 24603345 MNT JASPAR yes 27494492
chr1 24603337 24603342 MYC TRANSFAC yes 27494493
chr1 24603337 24603342 USF1 TRANSFAC yes 27494494
chr1 24603337 24603342 USF2 TRANSFAC yes 27494495
Genes associated with rs138998288[chr1:24603340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More