EnhancerDB
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  3. rs139005828[chr1:234623095]
Enhancers that have rs139005828[chr1:234623095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139005828[chr1:234623095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234622595 234623105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21393128
chr1 234623090 234623104 E2F7 JASPAR yes 36277613
chr1 234623091 234623103 E2F8 JASPAR yes 36277614
chr1 234623093 234624907 ZNF274 GTRD no Liver (HepG2) 21393157
chr1 234623093 234624907 ZNF274 GTRD no Liver (HepG2) 107879966
chr1 234623094 234623108 PLAG1 JASPAR yes 36277615
Genes associated with rs139005828[chr1:234623095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More