EnhancerDB
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  3. rs139012864[chr17:48954988]
Enhancers that have rs139012864[chr17:48954988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs139012864[chr17:48954988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48953754 48954996 ZNF143 GTRD no Epithelial (MCF-7) 21770038
chr17 48953819 48955016 ZNF143 GTRD no Epithelial (MCF-7) 21770040
chr17 48953851 48954996 ZNF143 GTRD no Epithelial (MCF-7) 21770041
chr17 48953897 48955125 ZNF274 GTRD no Liver (HepG2) 21770044
chr17 48953914 48955136 ZNF143 GTRD no Epithelial (MCF-7) 21770047
chr17 48953921 48955083 ZNF274 GTRD no Liver (HepG2) 21770049
chr17 48953969 48955084 ZNF143 GTRD no Epithelial (MCF-7) 21770054
chr17 48954267 48955125 ZNF143 GTRD no Epithelial (MCF-7) 21770100
chr17 48954301 48954997 ZNF274 GTRD no Liver (HepG2) 21770107
Genes associated with rs139012864[chr17:48954988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More