EnhancerDB
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  3. rs139087107[chr1:39662796]
Enhancers that have rs139087107[chr1:39662796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 39662647 39663006 vista1266
VISTA
Transcript factors that have rs139087107[chr1:39662796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39662782 39662797 STAT1 JASPAR yes 28266095
chr1 39662782 39662797 STAT1 JASPAR yes 118275621
chr1 39662794 39662802 MEIS2 JASPAR yes 28266100
chr1 39662794 39662802 MEIS3 JASPAR yes 28266101
chr1 39662794 39662802 MEIS2 JASPAR yes 118275626
chr1 39662794 39662802 MEIS3 JASPAR yes 118275627
Genes associated with rs139087107[chr1:39662796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More