EnhancerDB
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  3. rs139098200[chr12:125203090]
Enhancers that have rs139098200[chr12:125203090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139098200[chr12:125203090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125202604 125203994 ZBTB33 GTRD no Lung (A549) 21582256
chr12 125202705 125203880 ZNF274 GTRD no Cervix (HeLa-S3) 21582257
chr12 125202736 125203742 ZNF274 GTRD no Bone Marrow (K562) 21582258
chr12 125202790 125204065 ZBTB33 GTRD no Lung (A549) 21582259
chr12 125202808 125203650 ZBTB33 GTRD no Lung (A549) 21582260
chr12 125202815 125203615 ZNF143 GTRD no Epithelial (MCF-7) 21582261
chr12 125202881 125203590 ZBTB33 GTRD no Lung (A549) 21582262
chr12 125202934 125203743 ZNF143 GTRD no Epithelial (MCF-7) 21582263
chr12 125202936 125203594 ZNF274 GTRD no Bone Marrow (K562) 21582264
chr12 125202939 125203604 ZNF274 GTRD no Liver (HepG2) 21582265
chr12 125202961 125203794 ZNF274 GTRD no Bone Marrow (K562) 21582266
chr12 125202993 125203572 ZNF143 GTRD no Epithelial (MCF-7) 21582267
chr12 125203002 125203691 ZNF143 GTRD no Epithelial (MCF-7) 21582268
chr12 125203018 125203566 ZNF143 GTRD no Epithelial (MCF-7) 21582269
chr12 125203024 125203612 ZNF274 GTRD no Bone Marrow (K562) 21582270
chr12 125203025 125203575 ZNF274 GTRD no Cervix (HeLa-S3) 21582271
chr12 125203051 125203650 ZNF274 GTRD no Blood (GM12878) 21582272
chr12 125203055 125203544 ZNF274 GTRD no Bone Marrow (K562) 21582273
chr12 125203057 125203485 ZBTB33 GTRD no Lung (A549) 21582274
chr12 125203069 125203472 CTCF GTRD no Lung 21582275
chr12 125203070 125203585 ZNF274 GTRD no Liver (HepG2) 21582276
chr12 125203081 125203508 ZNF143 GTRD no Epithelial (MCF-7) 21582277
chr12 125203083 125203634 ZNF274 GTRD no Bone Marrow (K562) 21582278
chr12 125203085 125203623 ZNF274 GTRD no Cervix (HeLa-S3) 21582279
chr12 125203086 125203090 YY1 TRANSFAC yes 124412976
chr12 125203086 125203097 PROP1 JASPAR yes 124412977
Genes associated with rs139098200[chr12:125203090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More