EnhancerDB
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  3. rs139106078[chr1:24625972]
Enhancers that have rs139106078[chr1:24625972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs139106078[chr1:24625972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24625963 24625978 IRF9 JASPAR yes 27498045
chr1 24625964 24625978 IRF7 JASPAR yes 27498046
chr1 24625965 24625979 STAT1 JASPAR yes 27498047
chr1 24625966 24625979 DUXA JASPAR yes 27498048
chr1 24625967 24625978 DUX4 JASPAR yes 27498049
Genes associated with rs139106078[chr1:24625972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More