EnhancerDB
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  3. rs139119879[chr6:112309412]
Enhancers that have rs139119879[chr6:112309412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs139119879[chr6:112309412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112309408 112309422 TLX1 JASPAR yes 104394696
chr6 112309409 112309422 SMAD2 JASPAR yes 104394697
Genes associated with rs139119879[chr6:112309412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More