EnhancerDB
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  3. rs139128276[chr17:2779246]
Enhancers that have rs139128276[chr17:2779246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139128276[chr17:2779246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2779226 2779246 RREB1 JASPAR yes 52780913
chr17 2779233 2779248 FOXP1 JASPAR yes 52780919
chr17 2779234 2779246 FOXC2 JASPAR yes 52780921
chr17 2779234 2779249 STAT2 JASPAR yes 52780922
chr17 2779235 2779250 FOXP1 JASPAR yes 52780923
Genes associated with rs139128276[chr17:2779246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More