EnhancerDB
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  3. rs139130205[chr5:172216568]
Enhancers that have rs139130205[chr5:172216568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139130205[chr5:172216568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172215982 172216943 POLR2A UCSC Txn Factor no Conserved 108537503
chr5 172216558 172216573 TFAP2A JASPAR yes 67827141
chr5 172216558 172216573 TFAP2C JASPAR yes 67827142
chr5 172216561 172216572 TFAP2A JASPAR yes 67827143
chr5 172216561 172216572 TFAP2B JASPAR yes 67827144
chr5 172216561 172216572 TFAP2C JASPAR yes 67827145
Genes associated with rs139130205[chr5:172216568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More