EnhancerDB
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  3. rs139167630[chr16:89406200]
Enhancers that have rs139167630[chr16:89406200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 89406185 89406252 vista23564
VISTA
Transcript factors that have rs139167630[chr16:89406200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89404964 89406765 TCF7L2 GTRD no Colon (HCT116) 21738277
chr16 89404964 89406765 TCF7L2 GTRD no Colon (HCT116) 108225738
chr16 89405111 89406360 ZNF274 GTRD no Bone Marrow (K562) 21738278
chr16 89405111 89406360 ZNF274 GTRD no Bone Marrow (K562) 108225739
chr16 89405111 89406467 ZNF274 GTRD no Bone Marrow (K562) 21738279
chr16 89405111 89406467 ZNF274 GTRD no Bone Marrow (K562) 108225740
chr16 89405326 89406829 ZNF274 GTRD no Liver (HepG2) 21738280
chr16 89405326 89406829 ZNF274 GTRD no Liver (HepG2) 108225741
chr16 89405557 89406418 ZNF274 GTRD no Bone Marrow (K562) 21738281
chr16 89405557 89406418 ZNF274 GTRD no Bone Marrow (K562) 108225742
chr16 89405599 89406778 ZNF274 GTRD no Blood (GM12878) 21738282
chr16 89405599 89406778 ZNF274 GTRD no Blood (GM12878) 108225743
chr16 89406038 89406996 ZNF274 GTRD no Blood (GM12878) 21738283
chr16 89406038 89406996 ZNF274 GTRD no Blood (GM12878) 108225744
chr16 89406052 89406745 ZNF274 GTRD no Blood (GM12878) 21738284
chr16 89406052 89406745 ZNF274 GTRD no Blood (GM12878) 108225745
chr16 89406056 89407212 AR GTRD no Prostate (PC-3) 21738285
chr16 89406056 89407212 AR GTRD no Prostate (PC-3) 108225746
chr16 89406065 89408596 ZNF274 GTRD no Blood (GM12878) 21738286
chr16 89406065 89408596 ZNF274 GTRD no Blood (GM12878) 108225747
chr16 89406128 89407235 ZNF274 GTRD no Bone Marrow (K562) 21738287
chr16 89406128 89407235 ZNF274 GTRD no Bone Marrow (K562) 108225748
chr16 89406147 89406986 ZNF143 GTRD no Epithelial (MCF-7) 21738288
chr16 89406147 89406986 ZNF143 GTRD no Epithelial (MCF-7) 108225749
chr16 89406183 89406496 ZNF274 GTRD no Blood (GM12878) 21738289
chr16 89406183 89406496 ZNF274 GTRD no Blood (GM12878) 108225750
chr16 89406186 89407033 ZNF143 GTRD no Epithelial (MCF-7) 21738290
chr16 89406186 89407033 ZNF143 GTRD no Epithelial (MCF-7) 108225751
chr16 89406188 89406200 DBP JASPAR yes 12333444
chr16 89406188 89406200 HLF JASPAR yes 12333445
chr16 89406188 89406200 DBP JASPAR yes 49421384
chr16 89406188 89406200 HLF JASPAR yes 49421385
chr16 89406190 89406201 NFIL3 JASPAR yes 12333446
chr16 89406190 89406201 NFIL3 JASPAR yes 49421386
chr16 89406197 89406837 MYOD GTRD no Muscle (Myoblast) 21738291
chr16 89406197 89406837 MYOD GTRD no Muscle (Myoblast) 108225752
chr16 89406200 89406214 ZIC1 JASPAR yes 12333448
chr16 89406200 89406214 ZIC1 JASPAR yes 49421388
chr16 89406200 89406215 ZIC3 JASPAR yes 12333449
chr16 89406200 89406215 ZIC4 JASPAR yes 12333450
chr16 89406200 89406215 ZIC3 JASPAR yes 49421389
chr16 89406200 89406215 ZIC4 JASPAR yes 49421390
Genes associated with rs139167630[chr16:89406200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More