EnhancerDB
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  3. rs139177818[chr2:232555168]
Enhancers that have rs139177818[chr2:232555168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139177818[chr2:232555168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232555161 232555171 ID4 JASPAR yes 81737119
chr2 232555161 232555171 TCF3 JASPAR yes 81737120
chr2 232555161 232555171 TCF4 JASPAR yes 81737121
chr2 232555163 232555172 ZEB1 JASPAR yes 81737122
chr2 232555164 232555172 TBX5 JASPAR yes 81737123
Genes associated with rs139177818[chr2:232555168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More