EnhancerDB
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  3. rs139178452[chr1:8486958]
Enhancers that have rs139178452[chr1:8486958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139178452[chr1:8486958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8486953 8486965 FOXI1 JASPAR yes 26552448
chr1 8486954 8486966 FOXC2 JASPAR yes 26552449
chr1 8486954 8486968 FOXF2 JASPAR yes 26552450
chr1 8486954 8486968 ONECUT3 JASPAR yes 26552451
chr1 8486956 8486960 YY1 TRANSFAC yes 26552452
chr1 8486957 8486969 FOXI1 JASPAR yes 26552453
chr1 8486958 8486970 FOXC2 JASPAR yes 26552454
chr1 8486958 8486971 POU2F2 JASPAR yes 26552455
Genes associated with rs139178452[chr1:8486958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More