EnhancerDB
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  3. rs139196194[chr19:2620387]
Enhancers that have rs139196194[chr19:2620387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139196194[chr19:2620387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2620066 2624287 ZNF274 GTRD no Blood (GM12878) 21837675
chr19 2620066 2624287 ZNF274 GTRD no Blood (GM12878) 108363244
chr19 2620066 2624287 ZNF274 GTRD no Blood (GM12878) 108363245
chr19 2620092 2623718 ZNF274 GTRD no Blood (GM12878) 21837676
chr19 2620092 2623718 ZNF274 GTRD no Blood (GM12878) 108363246
chr19 2620092 2623718 ZNF274 GTRD no Blood (GM12878) 108363247
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 21837677
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363248
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363249
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363250
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363251
chr19 2620124 2622196 ZNF274 GTRD no Blood (GM12878) 21837678
chr19 2620124 2622196 ZNF274 GTRD no Blood (GM12878) 108363252
chr19 2620124 2622196 ZNF274 GTRD no Blood (GM12878) 108363253
chr19 2620130 2622197 ZNF274 GTRD no Blood (GM12878) 21837679
chr19 2620130 2622197 ZNF274 GTRD no Blood (GM12878) 108363254
chr19 2620130 2622197 ZNF274 GTRD no Blood (GM12878) 108363255
chr19 2620200 2622211 STAT3 GTRD no Blood (OCI-LY7) 21837680
chr19 2620200 2622211 STAT3 GTRD no Blood (OCI-LY7) 108363256
chr19 2620200 2622211 STAT3 GTRD no Blood (OCI-LY7) 108363257
chr19 2620215 2622196 ZNF274 GTRD no Blood (GM12878) 21837681
chr19 2620215 2622196 ZNF274 GTRD no Blood (GM12878) 108363258
chr19 2620215 2622196 ZNF274 GTRD no Blood (GM12878) 108363259
chr19 2620218 2621412 ZNF274 GTRD no Liver (HepG2) 21837682
chr19 2620218 2621412 ZNF274 GTRD no Liver (HepG2) 108363260
chr19 2620226 2622202 ZNF274 GTRD no Blood (GM12878) 21837683
chr19 2620226 2622202 ZNF274 GTRD no Blood (GM12878) 108363261
chr19 2620226 2622202 ZNF274 GTRD no Blood (GM12878) 108363262
chr19 2620241 2622227 ZNF274 GTRD no Blood (GM12878) 21837684
chr19 2620241 2622227 ZNF274 GTRD no Blood (GM12878) 108363263
chr19 2620241 2622227 ZNF274 GTRD no Blood (GM12878) 108363264
chr19 2620250 2621417 ZNF274 GTRD no Blood (GM12878) 21837685
chr19 2620250 2621417 ZNF274 GTRD no Blood (GM12878) 108363265
chr19 2620252 2621272 ZNF274 GTRD no Blood (GM12878) 21837686
chr19 2620252 2621272 ZNF274 GTRD no Blood (GM12878) 108363266
chr19 2620268 2621570 ZNF274 GTRD no Blood (GM12878) 21837687
chr19 2620268 2621570 ZNF274 GTRD no Blood (GM12878) 108363267
chr19 2620278 2621493 ZNF274 GTRD no Blood (GM12878) 21837688
chr19 2620278 2621493 ZNF274 GTRD no Blood (GM12878) 108363268
chr19 2620281 2621355 ZNF274 GTRD no Blood (GM12878) 21837689
chr19 2620281 2621355 ZNF274 GTRD no Blood (GM12878) 108363269
chr19 2620290 2621326 ZNF274 GTRD no Blood (GM12878) 21837690
chr19 2620290 2621326 ZNF274 GTRD no Blood (GM12878) 108363270
chr19 2620304 2621415 ZNF274 GTRD no Blood (GM12878) 21837691
chr19 2620304 2621415 ZNF274 GTRD no Blood (GM12878) 108363271
chr19 2620315 2621415 ZNF274 GTRD no Blood (GM12878) 21837692
chr19 2620315 2621415 ZNF274 GTRD no Blood (GM12878) 108363272
chr19 2620327 2621375 ZNF274 GTRD no Liver (HepG2) 21837693
chr19 2620327 2621375 ZNF274 GTRD no Liver (HepG2) 108363273
chr19 2620327 2621501 ZNF274 GTRD no Blood (GM12878) 21837694
chr19 2620327 2621501 ZNF274 GTRD no Blood (GM12878) 108363274
chr19 2620338 2621421 ZNF274 GTRD no Blood (GM12878) 21837695
chr19 2620338 2621421 ZNF274 GTRD no Blood (GM12878) 108363275
chr19 2620346 2621396 ZNF274 GTRD no Blood (GM12878) 21837696
chr19 2620346 2621396 ZNF274 GTRD no Blood (GM12878) 108363276
chr19 2620346 2621409 ZNF274 GTRD no Blood (GM12878) 21837697
chr19 2620346 2621409 ZNF274 GTRD no Blood (GM12878) 108363277
chr19 2620377 2621460 ZNF274 GTRD no Blood (GM12878) 21837698
chr19 2620377 2621460 ZNF274 GTRD no Blood (GM12878) 108363278
chr19 2620378 2621038 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21837699
chr19 2620378 2621038 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108363279
chr19 2620378 2621248 ZNF274 GTRD no Blood (GM12878) 21837700
chr19 2620378 2621248 ZNF274 GTRD no Blood (GM12878) 108363280
chr19 2620383 2620403 RREB1 JASPAR yes 112084285
chr19 2620384 2620404 RREB1 JASPAR yes 112084286
chr19 2620387 2620402 RUNX2 JASPAR yes 112084287
Genes associated with rs139196194[chr19:2620387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 952388 Lung 0.187732 16811