EnhancerDB
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  3. rs139196462[chr3:153004005]
Enhancers that have rs139196462[chr3:153004005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152999949 153013375 enh21048
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139196462[chr3:153004005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 153003993 153004006 SMAD2 JASPAR yes 6757461
chr3 153003999 153004013 MTF1 JASPAR yes 6757462
Genes associated with rs139196462[chr3:153004005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More