EnhancerDB
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  3. rs139203688[chr17:65418888]
Enhancers that have rs139203688[chr17:65418888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs139203688[chr17:65418888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 21782166
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 108285779
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 21782167
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 108285781
chr17 65418043 65419036 ZNF143 GTRD no Epithelial (MCF-7) 21782201
chr17 65418043 65419036 ZNF143 GTRD no Epithelial (MCF-7) 108285822
chr17 65418043 65419292 ZNF143 GTRD no Epithelial (MCF-7) 21782202
chr17 65418043 65419292 ZNF143 GTRD no Epithelial (MCF-7) 108285823
chr17 65418288 65419036 ZNF143 GTRD no Epithelial (MCF-7) 21782219
chr17 65418288 65419036 ZNF143 GTRD no Epithelial (MCF-7) 108285848
chr17 65418305 65419304 ZBTB33 GTRD no Lung (A549) 21782220
chr17 65418305 65419304 ZBTB33 GTRD no Lung (A549) 108285849
chr17 65418374 65419289 ZBTB33 GTRD no Lung (A549) 21782221
chr17 65418374 65419289 ZBTB33 GTRD no Lung (A549) 108285850
chr17 65418870 65418888 RARA JASPAR yes 55501614
chr17 65418877 65418890 NR2F1 JASPAR yes 55501615
chr17 65418881 65418889 CREB1 JASPAR yes 55501616
chr17 65418885 65418895 BHLHE40 JASPAR yes 55501617
chr17 65418885 65418895 BHLHE41 JASPAR yes 55501618
chr17 65418885 65418895 MLXIPL JASPAR yes 55501619
chr17 65418885 65418895 MLX JASPAR yes 55501620
chr17 65418885 65418895 SREBF2 JASPAR yes 55501621
chr17 65418885 65418895 TFE3 JASPAR yes 55501622
chr17 65418885 65418895 TFEB JASPAR yes 55501623
chr17 65418885 65418895 TFEC JASPAR yes 55501624
chr17 65418885 65418896 USF1 JASPAR yes 55501625
chr17 65418885 65418896 USF2 JASPAR yes 55501626
chr17 65418886 65418896 MAX JASPAR yes 55501627
chr17 65418887 65418892 MYC TRANSFAC yes 55501628
chr17 65418887 65418892 USF1 TRANSFAC yes 55501629
chr17 65418887 65418892 USF2 TRANSFAC yes 55501630
Genes associated with rs139203688[chr17:65418888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More