EnhancerDB
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  3. rs139209200[chr2:101727005]
Enhancers that have rs139209200[chr2:101727005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 101719143 101748878 enh18758
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr2 101726098 101729492 vista898
VISTA
Transcript factors that have rs139209200[chr2:101727005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 101726970 101727269 FOXA1 UCSC Txn Factor no Conserved 107690733
chr2 101726971 101727259 FOXA2 UCSC Txn Factor no Conserved 107690734
chr2 101727000 101727011 HOXD12 JASPAR yes 68269506
chr2 101727000 101727011 HOXD12 JASPAR yes 75787372
chr2 101727000 101727015 MYBL2 JASPAR yes 68269507
chr2 101727000 101727015 MYBL2 JASPAR yes 75787373
chr2 101727004 101727016 HNF1B JASPAR yes 68269508
chr2 101727004 101727016 HNF1B JASPAR yes 75787374
chr2 101727004 101727017 HNF1B JASPAR yes 68269509
chr2 101727004 101727017 HNF1B JASPAR yes 75787375
Genes associated with rs139209200[chr2:101727005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More