EnhancerDB
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  3. rs139228471[chr16:11395109]
Enhancers that have rs139228471[chr16:11395109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs139228471[chr16:11395109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11395093 11395110 RARA JASPAR yes 9503209
chr16 11395093 11395110 RXRA JASPAR yes 9503210
chr16 11395101 11395110 SNAI2 JASPAR yes 9503212
chr16 11395101 11395111 ID4 JASPAR yes 9503213
chr16 11395101 11395111 TCF3 JASPAR yes 9503214
chr16 11395101 11395111 TCF4 JASPAR yes 9503215
chr16 11395103 11395112 ZEB1 JASPAR yes 9503216
chr16 11395104 11395112 TBX5 JASPAR yes 9503217
Genes associated with rs139228471[chr16:11395109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More