EnhancerDB
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  3. rs139240996[chr6:16322503]
Enhancers that have rs139240996[chr6:16322503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139240996[chr6:16322503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16322485 16322506 IRF1 JASPAR yes 100287271
chr6 16322489 16322503 STAT1 JASPAR yes 100287272
chr6 16322489 16322504 STAT2 JASPAR yes 100287273
chr6 16322489 16322507 IRF2 JASPAR yes 100287274
chr6 16322502 16322506 YY1 TRANSFAC yes 100287276
Genes associated with rs139240996[chr6:16322503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More