EnhancerDB
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  3. rs139253106[chr6:16699576]
Enhancers that have rs139253106[chr6:16699576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16699529 16700051 vista51169
VISTA
Transcript factors that have rs139253106[chr6:16699576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16699571 16699579 MEIS2 JASPAR yes 70326731
chr6 16699571 16699579 MEIS3 JASPAR yes 70326732
chr6 16699571 16699579 MEIS2 JASPAR yes 100329445
chr6 16699571 16699579 MEIS3 JASPAR yes 100329446
chr6 16699572 16699576 NFE TRANSFAC yes 70326733
chr6 16699572 16699576 NFE TRANSFAC yes 100329447
chr6 16699576 16699580 YY1 TRANSFAC yes 70326734
chr6 16699576 16699580 YY1 TRANSFAC yes 100329448
Genes associated with rs139253106[chr6:16699576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More