EnhancerDB
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  3. rs139258717[chr6:109068517]
Enhancers that have rs139258717[chr6:109068517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs139258717[chr6:109068517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109068505 109068526 REST JASPAR yes 104201169
chr6 109068506 109068525 REST JASPAR yes 104201171
chr6 109068517 109068521 H4TF2 TRANSFAC yes 104201173
Genes associated with rs139258717[chr6:109068517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More