EnhancerDB
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  3. rs139261554[chr18:55869013]
Enhancers that have rs139261554[chr18:55869013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs139261554[chr18:55869013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55868992 55869013 IRF1 JASPAR yes 110925560
chr18 55869002 55869013 FOS JASPAR yes 110925564
chr18 55869004 55869015 BATF JASPAR yes 110925565
chr18 55869006 55869017 HOXC13 JASPAR yes 110925566
Genes associated with rs139261554[chr18:55869013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More