EnhancerDB
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  3. rs139279417[chr16:85273253]
Enhancers that have rs139279417[chr16:85273253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139279417[chr16:85273253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85272503 85273276 TCF7L2 GTRD no Colon (HCT116) 21721827
chr16 85273248 85273254 SP1 TRANSFAC yes 12037261
chr16 85273249 85273254 SP1 TRANSFAC yes 12037262
chr16 85273250 85273255 SP1 TRANSFAC yes 12037263
Genes associated with rs139279417[chr16:85273253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More