EnhancerDB
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  3. rs139290390[chr5:173191746]
Enhancers that have rs139290390[chr5:173191746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 173191567 173191754 vista50230
VISTA
Transcript factors that have rs139290390[chr5:173191746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173191296 173191846 TCF7L2 UCSC Txn Factor no Conserved 108537587
chr5 173191437 173191787 FOSL2 UCSC Txn Factor no Conserved 108537589
chr5 173191455 173191768 FOS UCSC Txn Factor no Conserved 108537590
chr5 173191467 173191767 CEBPB UCSC Txn Factor no Conserved 108537591
chr5 173191476 173191812 JUND UCSC Txn Factor no Conserved 108537592
chr5 173191744 173191748 NFE TRANSFAC yes 67902007
chr5 173191744 173191748 NFE TRANSFAC yes 70766654
chr5 173191745 173191750 GATA2 JASPAR yes 67902008
chr5 173191745 173191750 GATA2 JASPAR yes 70766655
Genes associated with rs139290390[chr5:173191746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More