EnhancerDB
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  3. rs139303409[chr16:11396100]
Enhancers that have rs139303409[chr16:11396100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs139303409[chr16:11396100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11395414 11397435 ZNF143 GTRD no Epithelial (MCF-7) 21690398
chr16 11395414 11397435 ZNF143 GTRD no Epithelial (MCF-7) 108181233
chr16 11395889 11397458 ZNF274 GTRD no Liver (HepG2) 21690399
chr16 11395889 11397458 ZNF274 GTRD no Liver (HepG2) 108181234
chr16 11396088 11396100 ZBTB7A JASPAR yes 9503398
chr16 11396089 11396101 ZBTB7B JASPAR yes 9503399
chr16 11396089 11396101 ZBTB7C JASPAR yes 9503400
chr16 11396096 11396100 H1TF2 TRANSFAC yes 9503401
chr16 11396096 11396100 NFE TRANSFAC yes 9503402
chr16 11396096 11396100 SRF TRANSFAC yes 9503403
Genes associated with rs139303409[chr16:11396100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More