EnhancerDB
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  3. rs139345049[chr1:154403236]
Enhancers that have rs139345049[chr1:154403236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139345049[chr1:154403236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154403076 154404287 ZNF274 GTRD no Blood (GM12878) 21340445
chr1 154403076 154404287 ZNF274 GTRD no Blood (GM12878) 107832613
chr1 154403225 154403238 POU2F2 JASPAR yes 32292079
chr1 154403226 154403238 POU3F1 JASPAR yes 32292080
chr1 154403226 154403238 POU3F2 JASPAR yes 32292081
chr1 154403228 154403237 POU3F4 JASPAR yes 32292082
chr1 154403228 154403237 POU5F1B JASPAR yes 32292083
chr1 154403233 154403237 YY1 TRANSFAC yes 32292084
Genes associated with rs139345049[chr1:154403236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More