EnhancerDB
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  3. rs139358954[chr1:39863007]
Enhancers that have rs139358954[chr1:39863007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139358954[chr1:39863007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39862993 39863007 PLAG1 JASPAR yes 28273406
chr1 39863004 39863017 NFKB1 JASPAR yes 28273408
chr1 39863006 39863012 ZNF354C JASPAR yes 28273409
Genes associated with rs139358954[chr1:39863007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More