EnhancerDB
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  3. rs139396882[chr1:203260144]
Enhancers that have rs139396882[chr1:203260144]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139396882[chr1:203260144]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858338
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858339
chr1 203259419 203260240 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858432
chr1 203259692 203260272 ELK4 UCSC Txn Factor no Conserved 107858475
chr1 203259717 203260146 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858479
chr1 203259890 203260266 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107858481
chr1 203260143 203260153 ELK1 JASPAR yes 34614452
Genes associated with rs139396882[chr1:203260144], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More