EnhancerDB
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  3. rs139412481[chr1:235123419]
Enhancers that have rs139412481[chr1:235123419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139412481[chr1:235123419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235123049 235123553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402641
chr1 235123109 235123439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402642
chr1 235123118 235123498 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402643
chr1 235123124 235123454 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402644
chr1 235123125 235123741 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402645
chr1 235123128 235123512 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402646
chr1 235123129 235123505 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402647
chr1 235123129 235123525 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402648
chr1 235123154 235123462 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402649
chr1 235123167 235123537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402650
chr1 235123183 235123523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402652
chr1 235123185 235123449 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402653
chr1 235123189 235123451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402654
chr1 235123194 235123584 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402655
chr1 235123198 235123538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402656
chr1 235123198 235123598 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402657
chr1 235123220 235123556 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402658
chr1 235123232 235123892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402660
chr1 235123233 235123493 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402661
chr1 235123242 235123602 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402662
chr1 235123252 235123848 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21402664
chr1 235123254 235123534 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402665
chr1 235123260 235123520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402667
chr1 235123262 235123858 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402668
chr1 235123264 235123494 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402669
chr1 235123268 235123492 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402670
chr1 235123270 235123610 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402671
chr1 235123275 235123575 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402672
chr1 235123276 235123546 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402673
chr1 235123289 235123809 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402674
chr1 235123302 235123822 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402675
chr1 235123306 235123682 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402676
chr1 235123354 235123674 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402677
chr1 235123358 235123430 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402678
chr1 235123365 235123785 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402679
chr1 235123380 235123557 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402680
chr1 235123389 235123699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402681
chr1 235123395 235123699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402682
chr1 235123396 235123763 ZNF274 GTRD no Bone Marrow (K562) 21402683
chr1 235123404 235123784 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402684
chr1 235123414 235123424 TBR1 JASPAR yes 36338837
chr1 235123414 235123425 TBX2 JASPAR yes 36338838
chr1 235123415 235123735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402685
chr1 235123416 235123699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402686
chr1 235123418 235123774 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402687
Genes associated with rs139412481[chr1:235123419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More