EnhancerDB
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  3. rs139429235[chr17:48982444]
Enhancers that have rs139429235[chr17:48982444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139429235[chr17:48982444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48981869 48982539 EP300 UCSC Txn Factor no Conserved 108271464
chr17 48981900 48982464 FLI1 GTRD no Muscle (A673) 21770607
chr17 48981927 48982640 FLI1 GTRD no Muscle (A673) 21770608
chr17 48982023 48982579 ZNF143 GTRD no Epithelial (MCF-7) 21770614
chr17 48982055 48982475 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770615
chr17 48982167 48982507 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770617
chr17 48982202 48982538 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770618
chr17 48982230 48982686 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770619
chr17 48982249 48982585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770620
chr17 48982274 48982511 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770621
chr17 48982276 48982496 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770622
chr17 48982297 48982470 ZNF143 GTRD no Epithelial (MCF-7) 21770623
chr17 48982298 48982512 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770624
chr17 48982310 48982509 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770625
chr17 48982432 48982450 RARA JASPAR yes 54731767
chr17 48982435 48982450 NR2C2 JASPAR yes 54731768
Genes associated with rs139429235[chr17:48982444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More