EnhancerDB
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  3. rs139435596[chr17:55565952]
Enhancers that have rs139435596[chr17:55565952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139435596[chr17:55565952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55565943 55565957 PLAG1 JASPAR yes 54960663
chr17 55565948 55565960 GLI2 JASPAR yes 54960664
chr17 55565951 55565956 SP1 TRANSFAC yes 54960665
Genes associated with rs139435596[chr17:55565952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More