EnhancerDB
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  3. rs139435866[chr1:27742962]
Enhancers that have rs139435866[chr1:27742962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139435866[chr1:27742962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27742955 27742976 IRF1 JASPAR yes 27691108
chr1 27742958 27742972 SPI1 JASPAR yes 27691109
chr1 27742961 27742968 SPIB JASPAR yes 27691110
Genes associated with rs139435866[chr1:27742962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More