EnhancerDB
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  3. rs139456940[chr3:176898023]
Enhancers that have rs139456940[chr3:176898023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176893264 176911265 enh7692
Skin (Keratinocyte) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs139456940[chr3:176898023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176898020 176898035 FOXP1 JASPAR yes 7842368
chr3 176898021 176898036 FOXP1 JASPAR yes 7842369
chr3 176898022 176898037 FOXP1 JASPAR yes 7842370
chr3 176898022 176898043 IRF1 JASPAR yes 7842371
chr3 176898023 176898038 FOXP1 JASPAR yes 7842372
chr3 176898023 176898044 IRF1 JASPAR yes 7842373
Genes associated with rs139456940[chr3:176898023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More