EnhancerDB
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  3. rs139463398[chr6:47106537]
Enhancers that have rs139463398[chr6:47106537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139463398[chr6:47106537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47106533 47106544 PHOX2A JASPAR yes 102002523
chr6 47106533 47106544 PROP1 JASPAR yes 102002524
chr6 47106534 47106538 YY1 TRANSFAC yes 102002525
chr6 47106536 47106546 ALX3 JASPAR yes 102002526
chr6 47106536 47106546 GSX1 JASPAR yes 102002527
chr6 47106536 47106546 GSX2 JASPAR yes 102002528
chr6 47106536 47106546 LHX6 JASPAR yes 102002529
chr6 47106536 47106546 MIXL1 JASPAR yes 102002530
chr6 47106536 47106546 MNX1 JASPAR yes 102002531
chr6 47106536 47106546 NOTO JASPAR yes 102002532
chr6 47106536 47106546 POU6F1 JASPAR yes 102002533
chr6 47106536 47106546 RAX JASPAR yes 102002534
chr6 47106536 47106551 HNF1A JASPAR yes 102002535
chr6 47106537 47106545 ISX JASPAR yes 102002536
chr6 47106537 47106545 LMX1A JASPAR yes 102002537
chr6 47106537 47106545 LMX1B JASPAR yes 102002538
chr6 47106537 47106545 NKX6-1 JASPAR yes 102002539
chr6 47106537 47106545 NKX6-2 JASPAR yes 102002540
chr6 47106537 47106545 PRRX1 JASPAR yes 102002541
chr6 47106537 47106545 RAX2 JASPAR yes 102002542
chr6 47106537 47106545 SHOX JASPAR yes 102002543
chr6 47106537 47106545 UNCX JASPAR yes 102002544
chr6 47106537 47106545 VAX1 JASPAR yes 102002545
chr6 47106537 47106548 PHOX2A JASPAR yes 102002546
chr6 47106537 47106548 PROP1 JASPAR yes 102002547
chr6 47106537 47106551 POU4F1 JASPAR yes 102002548
chr6 47106537 47106553 POU4F2 JASPAR yes 102002549
chr6 47106537 47106553 POU4F3 JASPAR yes 102002550
Genes associated with rs139463398[chr6:47106537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More