EnhancerDB
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  3. rs139479193[chr17:48955524]
Enhancers that have rs139479193[chr17:48955524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs139479193[chr17:48955524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48955157 48955648 ZNF274 GTRD no Bone Marrow (K562) 21770115
chr17 48955193 48955667 ZNF143 GTRD no Epithelial (MCF-7) 21770116
chr17 48955264 48955528 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770117
chr17 48955517 48955524 TBP TRANSFAC yes 54727657
chr17 48955517 48955524 TFIID TRANSFAC yes 54727658
chr17 48955523 48955537 SPI1 JASPAR yes 54727659
Genes associated with rs139479193[chr17:48955524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More