EnhancerDB
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  3. rs139479643[chr1:117424332]
Enhancers that have rs139479643[chr1:117424332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs139479643[chr1:117424332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117424325 117424345 TP53 JASPAR yes 31848455
chr1 117424328 117424346 TP53 JASPAR yes 31848456
chr1 117424329 117424344 TP53 JASPAR yes 31848457
Genes associated with rs139479643[chr1:117424332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More