EnhancerDB
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  3. rs1394801[chr12:116975847]
Enhancers that have rs1394801[chr12:116975847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1394801[chr12:116975847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 21577296
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 108061742
chr12 116975558 116976448 TEF1 GTRD no Bone (Osteoblast) 21577320
chr12 116975712 116976251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577321
chr12 116975728 116976324 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577322
chr12 116975776 116976292 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577323
chr12 116975818 116976202 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577324
chr12 116975824 116976120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577325
chr12 116975840 116975848 HOXA5 JASPAR yes 124008651
chr12 116975843 116975856 POU2F2 JASPAR yes 124008652
Genes associated with rs1394801[chr12:116975847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More