EnhancerDB
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  3. rs139481789[chr1:19795109]
Enhancers that have rs139481789[chr1:19795109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 19794978 19795283 vista616
VISTA
Transcript factors that have rs139481789[chr1:19795109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19794662 19795113 P63 GTRD no Skin (Keratinocyte) 107802305
chr1 19795098 19795113 MEF2C JASPAR yes 27194759
chr1 19795098 19795113 MEF2C JASPAR yes 118243494
Genes associated with rs139481789[chr1:19795109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More