EnhancerDB
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  3. rs139499974[chr15:42234388]
Enhancers that have rs139499974[chr15:42234388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139499974[chr15:42234388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42234373 42234388 HNF4A JASPAR yes 23008235
chr15 42234385 42234391 NFE2 TRANSFAC yes 23008236
chr15 42234388 42234402 PLAG1 JASPAR yes 23008237
Genes associated with rs139499974[chr15:42234388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More