EnhancerDB
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  3. rs139527659[chr17:55531388]
Enhancers that have rs139527659[chr17:55531388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139527659[chr17:55531388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55531373 55531388 SCRT1 JASPAR yes 54955937
chr17 55531375 55531388 SCRT2 JASPAR yes 54955942
chr17 55531376 55531390 PLAG1 JASPAR yes 54955944
Genes associated with rs139527659[chr17:55531388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More