EnhancerDB
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  3. rs139540608[chr19:5966678]
Enhancers that have rs139540608[chr19:5966678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139540608[chr19:5966678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5965936 5967010 TEF1 GTRD no Bone (Osteoblast) 21843739
chr19 5965936 5967010 TEF1 GTRD no Bone (Osteoblast) 108376090
chr19 5966074 5966708 ZBTB33 GTRD no Brain (SK-N-SH) 21843741
chr19 5966074 5966708 ZBTB33 GTRD no Brain (SK-N-SH) 108376092
chr19 5966088 5966761 ZBTB33 GTRD no Brain (SK-N-SH) 21843742
chr19 5966088 5966761 ZBTB33 GTRD no Brain (SK-N-SH) 108376093
chr19 5966115 5966689 ZBTB33 GTRD no Brain (SK-N-SH) 21843746
chr19 5966115 5966689 ZBTB33 GTRD no Brain (SK-N-SH) 108376097
chr19 5966352 5966687 ZNF274 GTRD no Bone Marrow (K562) 21843753
chr19 5966352 5966687 ZNF274 GTRD no Bone Marrow (K562) 108376104
chr19 5966670 5966684 E2F7 JASPAR yes 112249386
chr19 5966671 5966683 E2F8 JASPAR yes 112249387
chr19 5966677 5966689 MEF2A JASPAR yes 112249388
chr19 5966677 5966689 MEF2D JASPAR yes 112249389
Genes associated with rs139540608[chr19:5966678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More